BioExtremeEvent

Victoria Delannoy, Nicolas Loiseau, Sébastien Villéger

2026-04-03

Source: vignettes/BioExtremeEvent.Rmd

About this tutorial


This tutorial describes the basic workflow showing how to characterized step by step extrem event (Marine Heat Wave, water stress…) using BioExtremeEvent package.

DATA: The dataset used to illustrate this tutorial is a spatraster of the sea surface temperature in Gulf of Lion extract from Copernicus, product: cmems_SST_MED_SST_L4_REP_OBSERVATIONS_010_021.


The use of the BioExtremeEvent package is based on a pipeline. This tutorial will guide you through the main framework, illustrated in the flowchart below, step by step.


FRAMEWORK:

Framework of the BioExtremeEvent package

Framework of the BioExtremeEvent package

Install the BioExtremeEvent package 

## Install < remotes > package (if not already installed) ----
if (!requireNamespace("remotes", quietly = TRUE)) {
  install.packages("remotes")
}

## Install < BioExtremeEvent > from GitHub ----
remotes::install_github("VicoDelannoy/BioExtremeEvent")